Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
H2AFXP16104 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
H2AFXP16104 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
H2AFXP16104 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
H2AFXP16104 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.72■□□□□ 0.59
H2AFXP16104 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.72■□□□□ 0.59
H2AFXP16104 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.72■□□□□ 0.59
H2AFXP16104 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.72■□□□□ 0.59
H2AFXP16104 PRSS44-201ENST00000515154 1146 ntBASIC18.72■□□□□ 0.59
H2AFXP16104 AC142381.2-201ENST00000566120 298 ntBASIC18.72■□□□□ 0.59
H2AFXP16104 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
H2AFXP16104 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 AC024909.3-201ENST00000611513 2257 ntBASIC18.72■□□□□ 0.59
H2AFXP16104 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.72■□□□□ 0.59
H2AFXP16104 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.72■□□□□ 0.59
H2AFXP16104 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.72■□□□□ 0.59
H2AFXP16104 AC092171.3-201ENST00000610122 2651 ntBASIC18.72■□□□□ 0.59
H2AFXP16104 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H2AFXP16104 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
H2AFXP16104 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.71■□□□□ 0.59
H2AFXP16104 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
H2AFXP16104 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.71■□□□□ 0.59
H2AFXP16104 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.71■□□□□ 0.59
H2AFXP16104 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.71■□□□□ 0.59
H2AFXP16104 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
H2AFXP16104 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 DUTP2-201ENST00000519164 463 ntBASIC18.71■□□□□ 0.59
H2AFXP16104 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.71■□□□□ 0.59
H2AFXP16104 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.71■□□□□ 0.59
H2AFXP16104 C1QL1P1-201ENST00000568105 661 ntBASIC18.71■□□□□ 0.59
H2AFXP16104 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
H2AFXP16104 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.71■□□□□ 0.59
H2AFXP16104 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.71■□□□□ 0.59
H2AFXP16104 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2AFXP16104 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.71■□□□□ 0.59
H2AFXP16104 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.58
H2AFXP16104 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
H2AFXP16104 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
H2AFXP16104 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.7■□□□□ 0.58
H2AFXP16104 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
H2AFXP16104 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
H2AFXP16104 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.7■□□□□ 0.58
H2AFXP16104 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.7■□□□□ 0.58
H2AFXP16104 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
H2AFXP16104 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.7■□□□□ 0.58
H2AFXP16104 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
H2AFXP16104 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
H2AFXP16104 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.7■□□□□ 0.58
H2AFXP16104 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.7■□□□□ 0.58
H2AFXP16104 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
H2AFXP16104 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 RNF216P1-203ENST00000404404 2427 ntBASIC18.7■□□□□ 0.58
H2AFXP16104 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H2AFXP16104 BCL2-203ENST00000589955 5011 ntBASIC18.69■□□□□ 0.58
H2AFXP16104 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.69■□□□□ 0.58
H2AFXP16104 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2AFXP16104 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2AFXP16104 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.69■□□□□ 0.58
H2AFXP16104 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2AFXP16104 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
H2AFXP16104 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
H2AFXP16104 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.69■□□□□ 0.58
H2AFXP16104 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms