Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MMP3P08254 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP3P08254 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP3P08254 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP3P08254 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MMP3P08254 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
MMP3P08254 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
MMP3P08254 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
MMP3P08254 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP3P08254 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP3P08254 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP3P08254 MIR1233-2-201ENST00000408138 82 ntBASIC19.87■□□□□ 0.77
MMP3P08254 MIR1233-1-201ENST00000408722 82 ntBASIC19.87■□□□□ 0.77
MMP3P08254 MED15P5-201ENST00000423150 992 ntBASIC19.87■□□□□ 0.77
MMP3P08254 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP3P08254 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.87■□□□□ 0.77
MMP3P08254 AL022326.1-202ENST00000641533 845 ntBASIC19.87■□□□□ 0.77
MMP3P08254 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP3P08254 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MMP3P08254 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP3P08254 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP3P08254 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.87■□□□□ 0.77
MMP3P08254 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MMP3P08254 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP3P08254 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP3P08254 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.86■□□□□ 0.77
MMP3P08254 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MMP3P08254 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP3P08254 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP3P08254 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
MMP3P08254 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
MMP3P08254 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.86■□□□□ 0.77
MMP3P08254 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.86■□□□□ 0.77
MMP3P08254 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
MMP3P08254 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 AL356488.2-201ENST00000602755 427 ntBASIC19.86■□□□□ 0.77
MMP3P08254 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 FAM197Y3-203ENST00000618346 717 ntBASIC19.86■□□□□ 0.77
MMP3P08254 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP3P08254 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MMP3P08254 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MMP3P08254 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP3P08254 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP3P08254 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MMP3P08254 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 AC022898.2-201ENST00000616822 1312 ntBASIC19.85■□□□□ 0.77
MMP3P08254 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MMP3P08254 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MMP3P08254 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MMP3P08254 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP3P08254 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.85■□□□□ 0.77
MMP3P08254 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.85■□□□□ 0.77
MMP3P08254 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.85■□□□□ 0.77
MMP3P08254 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP3P08254 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
MMP3P08254 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MMP3P08254 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
MMP3P08254 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MMP3P08254 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
MMP3P08254 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP3P08254 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP3P08254 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
MMP3P08254 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
MMP3P08254 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MMP3P08254 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP3P08254 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms