Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A1P02452 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.6■■□□□ 1.05
COL1A1P02452 AC012640.2-201ENST00000561606 901 ntBASIC21.6■■□□□ 1.05
COL1A1P02452 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.6■■□□□ 1.05
COL1A1P02452 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.6■■□□□ 1.05
COL1A1P02452 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A1P02452 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A1P02452 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.6■■□□□ 1.05
COL1A1P02452 AC116407.3-201ENST00000623905 1129 ntBASIC21.6■■□□□ 1.05
COL1A1P02452 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.6■■□□□ 1.05
COL1A1P02452 AP000867.4-201ENST00000641616 219 ntBASIC21.6■■□□□ 1.05
COL1A1P02452 AC087289.5-201ENST00000586076 3175 ntBASIC21.6■■□□□ 1.05
COL1A1P02452 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.6■■□□□ 1.05
COL1A1P02452 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A1P02452 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A1P02452 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A1P02452 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COL1A1P02452 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.59■■□□□ 1.05
COL1A1P02452 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.59■■□□□ 1.05
COL1A1P02452 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
COL1A1P02452 FAM197Y3-203ENST00000618346 717 ntBASIC21.59■■□□□ 1.05
COL1A1P02452 AL139288.1-201ENST00000623748 933 ntBASIC21.59■■□□□ 1.05
COL1A1P02452 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COL1A1P02452 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.59■■□□□ 1.05
COL1A1P02452 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
COL1A1P02452 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.59■■□□□ 1.05
COL1A1P02452 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A1P02452 AC097374.2-201ENST00000618617 1306 ntBASIC21.58■■□□□ 1.05
COL1A1P02452 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.58■■□□□ 1.05
COL1A1P02452 RPS2P1-201ENST00000434010 821 ntBASIC21.58■■□□□ 1.05
COL1A1P02452 AL591424.1-201ENST00000442569 1213 ntBASIC21.58■■□□□ 1.05
COL1A1P02452 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.58■■□□□ 1.05
COL1A1P02452 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
COL1A1P02452 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.58■■□□□ 1.05
COL1A1P02452 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.58■■□□□ 1.05
COL1A1P02452 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.58■■□□□ 1.05
COL1A1P02452 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.58■■□□□ 1.05
COL1A1P02452 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.58■■□□□ 1.05
COL1A1P02452 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A1P02452 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
COL1A1P02452 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
COL1A1P02452 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL1A1P02452 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL1A1P02452 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL1A1P02452 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL1A1P02452 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.58■■□□□ 1.04
COL1A1P02452 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL1A1P02452 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.58■■□□□ 1.04
COL1A1P02452 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
COL1A1P02452 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
COL1A1P02452 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A1P02452 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A1P02452 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A1P02452 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
COL1A1P02452 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.57■■□□□ 1.04
COL1A1P02452 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A1P02452 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A1P02452 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A1P02452 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A1P02452 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms