Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TRBC1P01850 AL390961.4-201ENST00000623958 2535 ntBASIC18.06■□□□□ 0.48
TRBC1P01850 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBC1P01850 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRBC1P01850 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.06■□□□□ 0.48
TRBC1P01850 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.06■□□□□ 0.48
TRBC1P01850 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRBC1P01850 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBC1P01850 MIR3180-1-201ENST00000580374 94 ntBASIC18.06■□□□□ 0.48
TRBC1P01850 MIR3180-3-201ENST00000584616 94 ntBASIC18.06■□□□□ 0.48
TRBC1P01850 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBC1P01850 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.06■□□□□ 0.48
TRBC1P01850 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 FLJ13224-201ENST00000313737 1514 ntBASIC18.06■□□□□ 0.48
TRBC1P01850 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBC1P01850 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBC1P01850 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBC1P01850 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBC1P01850 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBC1P01850 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRBC1P01850 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 AC138028.4-201ENST00000564984 1845 ntBASIC18.05■□□□□ 0.48
TRBC1P01850 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBC1P01850 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 AP000997.3-201ENST00000623333 2250 ntBASIC18.05■□□□□ 0.48
TRBC1P01850 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRBC1P01850 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRBC1P01850 DRAXINP1-201ENST00000437611 948 ntBASIC18.05■□□□□ 0.48
TRBC1P01850 MTCL1P1-201ENST00000446207 792 ntBASIC18.05■□□□□ 0.48
TRBC1P01850 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBC1P01850 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBC1P01850 TPSP2-201ENST00000561760 610 ntBASIC18.05■□□□□ 0.48
TRBC1P01850 AL353801.3-201ENST00000609898 542 ntBASIC18.05■□□□□ 0.48
TRBC1P01850 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBC1P01850 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.05■□□□□ 0.48
TRBC1P01850 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBC1P01850 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBC1P01850 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRBC1P01850 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBC1P01850 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBC1P01850 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.04■□□□□ 0.48
TRBC1P01850 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRBC1P01850 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.04■□□□□ 0.48
TRBC1P01850 AC022898.2-201ENST00000616822 1312 ntBASIC18.04■□□□□ 0.48
TRBC1P01850 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRBC1P01850 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.04■□□□□ 0.48
TRBC1P01850 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBC1P01850 AL845331.1-201ENST00000424978 1190 ntBASIC18.04■□□□□ 0.48
TRBC1P01850 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TRBC1P01850 AC112698.1-201ENST00000510299 916 ntBASIC18.04■□□□□ 0.48
TRBC1P01850 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TRBC1P01850 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBC1P01850 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TRBC1P01850 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRBC1P01850 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBC1P01850 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBC1P01850 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TRBC1P01850 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBC1P01850 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.04■□□□□ 0.48
TRBC1P01850 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRBC1P01850 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBC1P01850 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBC1P01850 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms