Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.98■□□□□ 0.31
SNX4O95219 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SNX4O95219 AL357033.4-201ENST00000617703 1807 ntBASIC16.98■□□□□ 0.31
SNX4O95219 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX4O95219 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.98■□□□□ 0.31
SNX4O95219 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.97■□□□□ 0.31
SNX4O95219 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX4O95219 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX4O95219 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX4O95219 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 AL359075.1-203ENST00000462729 1002 ntBASIC16.97■□□□□ 0.31
SNX4O95219 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX4O95219 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SNX4O95219 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX4O95219 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SNX4O95219 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX4O95219 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX4O95219 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX4O95219 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.96■□□□□ 0.31
SNX4O95219 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SNX4O95219 MTMR9LP-203ENST00000426597 1545 ntBASIC16.96■□□□□ 0.31
SNX4O95219 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SNX4O95219 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SNX4O95219 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 AP000593.1-201ENST00000393668 712 ntBASIC16.96■□□□□ 0.31
SNX4O95219 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 RASA4DP-201ENST00000460726 1199 ntBASIC16.96■□□□□ 0.31
SNX4O95219 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SNX4O95219 AC009065.1-201ENST00000564055 1225 ntBASIC16.96■□□□□ 0.31
SNX4O95219 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
SNX4O95219 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.96■□□□□ 0.31
SNX4O95219 MYC-208ENST00000641036 567 ntBASIC16.96■□□□□ 0.31
SNX4O95219 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.96■□□□□ 0.31
SNX4O95219 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SNX4O95219 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SNX4O95219 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX4O95219 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX4O95219 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
SNX4O95219 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX4O95219 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX4O95219 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX4O95219 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.96■□□□□ 0.3
SNX4O95219 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX4O95219 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNX4O95219 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNX4O95219 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SNX4O95219 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.95■□□□□ 0.3
SNX4O95219 KRT18P41-201ENST00000518924 1277 ntBASIC16.95■□□□□ 0.3
SNX4O95219 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.95■□□□□ 0.3
SNX4O95219 MIR3917-201ENST00000580971 93 ntBASIC16.95■□□□□ 0.3
SNX4O95219 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.95■□□□□ 0.3
SNX4O95219 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.95■□□□□ 0.3
SNX4O95219 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNX4O95219 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX4O95219 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
SNX4O95219 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX4O95219 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNX4O95219 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms