Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC24.88■■□□□ 1.57
BRD4O60885 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC24.88■■□□□ 1.57
BRD4O60885 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC24.88■■□□□ 1.57
BRD4O60885 AL024508.2-201ENST00000607749 1894 ntBASIC24.88■■□□□ 1.57
BRD4O60885 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC24.88■■□□□ 1.57
BRD4O60885 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC24.88■■□□□ 1.57
BRD4O60885 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC24.88■■□□□ 1.57
BRD4O60885 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC24.88■■□□□ 1.57
BRD4O60885 FGFR3P6-201ENST00000457012 610 ntBASIC24.88■■□□□ 1.57
BRD4O60885 AC068472.1-201ENST00000474589 881 ntBASIC24.88■■□□□ 1.57
BRD4O60885 RNPS1P1-201ENST00000507437 918 ntBASIC24.88■■□□□ 1.57
BRD4O60885 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC24.88■■□□□ 1.57
BRD4O60885 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 AC009533.2-201ENST00000543664 586 ntBASIC24.88■■□□□ 1.57
BRD4O60885 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC24.88■■□□□ 1.57
BRD4O60885 MIR7706-201ENST00000613747 67 ntBASIC24.88■■□□□ 1.57
BRD4O60885 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC24.88■■□□□ 1.57
BRD4O60885 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 NOC2LP1-202ENST00000452600 2235 ntBASIC24.88■■□□□ 1.57
BRD4O60885 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC24.88■■□□□ 1.57
BRD4O60885 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
BRD4O60885 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC24.87■■□□□ 1.57
BRD4O60885 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 THAP5-204ENST00000438865 868 ntTSL 2 BASIC24.87■■□□□ 1.57
BRD4O60885 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24.87■■□□□ 1.57
BRD4O60885 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC24.87■■□□□ 1.57
BRD4O60885 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
BRD4O60885 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
BRD4O60885 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC24.87■■□□□ 1.57
BRD4O60885 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC24.87■■□□□ 1.57
BRD4O60885 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC24.87■■□□□ 1.57
BRD4O60885 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 TP73-AS1-210ENST00000637775 1455 ntBASIC24.86■■□□□ 1.57
BRD4O60885 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
BRD4O60885 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC24.86■■□□□ 1.57
BRD4O60885 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 SCARNA2-201ENST00000458748 420 ntBASIC24.86■■□□□ 1.57
BRD4O60885 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 AC011467.2-201ENST00000598425 242 ntBASIC24.86■■□□□ 1.57
BRD4O60885 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC24.86■■□□□ 1.57
BRD4O60885 AF228730.7-201ENST00000641842 219 ntBASIC24.86■■□□□ 1.57
BRD4O60885 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC24.86■■□□□ 1.57
BRD4O60885 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 NARF-204ENST00000390006 1766 ntTSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC24.86■■□□□ 1.57
BRD4O60885 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
BRD4O60885 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.86■■□□□ 1.57
BRD4O60885 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC24.85■■□□□ 1.57
BRD4O60885 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 RCN1P2-201ENST00000398357 915 ntBASIC24.85■■□□□ 1.57
BRD4O60885 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC24.85■■□□□ 1.57
BRD4O60885 AC132008.2-207ENST00000454517 770 ntBASIC24.85■■□□□ 1.57
BRD4O60885 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC24.85■■□□□ 1.57
BRD4O60885 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC24.85■■□□□ 1.57
BRD4O60885 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
BRD4O60885 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
BRD4O60885 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC24.85■■□□□ 1.57
BRD4O60885 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
BRD4O60885 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.85■■□□□ 1.57
BRD4O60885 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms