Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
HCN1O60741 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HCN1O60741 HYMAI.1-201ENST00000620949 238 ntBASIC16.89■□□□□ 0.29
HCN1O60741 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.89■□□□□ 0.29
HCN1O60741 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.89■□□□□ 0.29
HCN1O60741 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HCN1O60741 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HCN1O60741 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HCN1O60741 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
HCN1O60741 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HCN1O60741 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HCN1O60741 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.88■□□□□ 0.29
HCN1O60741 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.88■□□□□ 0.29
HCN1O60741 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 VENTXP5-201ENST00000523979 775 ntBASIC16.88■□□□□ 0.29
HCN1O60741 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.88■□□□□ 0.29
HCN1O60741 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.88■□□□□ 0.29
HCN1O60741 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.88■□□□□ 0.29
HCN1O60741 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.88■□□□□ 0.29
HCN1O60741 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 AC005332.1-201ENST00000577698 1310 ntBASIC16.88■□□□□ 0.29
HCN1O60741 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCN1O60741 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HCN1O60741 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.87■□□□□ 0.29
HCN1O60741 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HCN1O60741 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.87■□□□□ 0.29
HCN1O60741 AC083849.1-201ENST00000615227 514 ntBASIC16.87■□□□□ 0.29
HCN1O60741 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.87■□□□□ 0.29
HCN1O60741 AC116407.4-201ENST00000623319 1061 ntBASIC16.87■□□□□ 0.29
HCN1O60741 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HCN1O60741 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.87■□□□□ 0.29
HCN1O60741 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
HCN1O60741 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.87■□□□□ 0.29
HCN1O60741 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HCN1O60741 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
HCN1O60741 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCN1O60741 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HCN1O60741 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
HCN1O60741 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.86■□□□□ 0.29
HCN1O60741 AC067852.2-201ENST00000590513 2313 ntBASIC16.86■□□□□ 0.29
HCN1O60741 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.86■□□□□ 0.29
HCN1O60741 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.86■□□□□ 0.29
HCN1O60741 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 SEC1P-202ENST00000473944 940 ntBASIC16.86■□□□□ 0.29
HCN1O60741 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.86■□□□□ 0.29
HCN1O60741 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.86■□□□□ 0.29
HCN1O60741 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.86■□□□□ 0.29
HCN1O60741 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HCN1O60741 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms