Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21■□□□□ 0.95
CTNND1O60716 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CTNND1O60716 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CTNND1O60716 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CTNND1O60716 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21■□□□□ 0.95
CTNND1O60716 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CTNND1O60716 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.99■□□□□ 0.95
CTNND1O60716 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CTNND1O60716 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.99■□□□□ 0.95
CTNND1O60716 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.99■□□□□ 0.95
CTNND1O60716 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 MED15P5-201ENST00000423150 992 ntBASIC20.99■□□□□ 0.95
CTNND1O60716 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.99■□□□□ 0.95
CTNND1O60716 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.99■□□□□ 0.95
CTNND1O60716 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CTNND1O60716 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CTNND1O60716 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CTNND1O60716 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.99■□□□□ 0.95
CTNND1O60716 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CTNND1O60716 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CTNND1O60716 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTNND1O60716 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.98■□□□□ 0.95
CTNND1O60716 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CTNND1O60716 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.98■□□□□ 0.95
CTNND1O60716 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CTNND1O60716 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.98■□□□□ 0.95
CTNND1O60716 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.98■□□□□ 0.95
CTNND1O60716 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.98■□□□□ 0.95
CTNND1O60716 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.98■□□□□ 0.95
CTNND1O60716 AL356488.2-201ENST00000602755 427 ntBASIC20.98■□□□□ 0.95
CTNND1O60716 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.98■□□□□ 0.95
CTNND1O60716 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 ESPNP-201ENST00000270691 2015 ntBASIC20.98■□□□□ 0.95
CTNND1O60716 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.98■□□□□ 0.95
CTNND1O60716 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTNND1O60716 PMPCAP1-201ENST00000508114 1576 ntBASIC20.97■□□□□ 0.95
CTNND1O60716 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.97■□□□□ 0.95
CTNND1O60716 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CTNND1O60716 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.97■□□□□ 0.95
CTNND1O60716 AC079776.2-201ENST00000641154 1609 ntBASIC20.97■□□□□ 0.95
CTNND1O60716 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CTNND1O60716 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CTNND1O60716 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 LAGE3P1-201ENST00000425356 484 ntBASIC20.97■□□□□ 0.95
CTNND1O60716 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.97■□□□□ 0.95
CTNND1O60716 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.97■□□□□ 0.95
CTNND1O60716 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CTNND1O60716 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.97■□□□□ 0.95
CTNND1O60716 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CTNND1O60716 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.97■□□□□ 0.95
CTNND1O60716 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.97■□□□□ 0.95
CTNND1O60716 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CTNND1O60716 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CTNND1O60716 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.97■□□□□ 0.95
CTNND1O60716 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CTNND1O60716 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CTNND1O60716 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTNND1O60716 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CTNND1O60716 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CTNND1O60716 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CTNND1O60716 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CTNND1O60716 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms