Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 KRT8P47-201ENST00000604727 1398 ntBASIC17.29■□□□□ 0.36
PRICKLE3O43900 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 IGHV3-47-201ENST00000425060 335 ntBASIC17.29■□□□□ 0.36
PRICKLE3O43900 HCG4P8-203ENST00000443049 980 ntBASIC17.29■□□□□ 0.36
PRICKLE3O43900 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PRICKLE3O43900 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRICKLE3O43900 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 AL390961.4-201ENST00000623958 2535 ntBASIC17.28■□□□□ 0.36
PRICKLE3O43900 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 LINC00265-3P-201ENST00000447588 903 ntBASIC17.28■□□□□ 0.36
PRICKLE3O43900 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRICKLE3O43900 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
PRICKLE3O43900 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.27■□□□□ 0.36
PRICKLE3O43900 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PRICKLE3O43900 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PRICKLE3O43900 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms