Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC093010.1-201ENST00000473625 1624 ntBASIC19.23■□□□□ 0.67
HOXA2O43364 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HOXA2O43364 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXA2O43364 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXA2O43364 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA2O43364 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXA2O43364 DUTP2-201ENST00000519164 463 ntBASIC19.23■□□□□ 0.67
HOXA2O43364 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 AC012640.2-201ENST00000561606 901 ntBASIC19.23■□□□□ 0.67
HOXA2O43364 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXA2O43364 AC073592.4-201ENST00000623827 446 ntBASIC19.23■□□□□ 0.67
HOXA2O43364 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 PMPCAP1-201ENST00000508114 1576 ntBASIC19.23■□□□□ 0.67
HOXA2O43364 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA2O43364 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA2O43364 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HOXA2O43364 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HOXA2O43364 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
HOXA2O43364 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA2O43364 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HOXA2O43364 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXA2O43364 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.22■□□□□ 0.67
HOXA2O43364 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXA2O43364 RNA5SP415-201ENST00000517246 115 ntBASIC19.22■□□□□ 0.67
HOXA2O43364 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 AC034105.1-201ENST00000563488 319 ntBASIC19.22■□□□□ 0.67
HOXA2O43364 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA2O43364 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HOXA2O43364 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA2O43364 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA2O43364 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA2O43364 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA2O43364 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA2O43364 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA2O43364 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HOXA2O43364 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA2O43364 AC006557.2-201ENST00000592985 1240 ntBASIC19.21■□□□□ 0.67
HOXA2O43364 AC140113.2-201ENST00000604370 208 ntBASIC19.21■□□□□ 0.67
HOXA2O43364 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 PGM5P2-202ENST00000637225 1043 ntBASIC19.21■□□□□ 0.67
HOXA2O43364 AC120498.9-201ENST00000339021 3867 ntBASIC19.21■□□□□ 0.67
HOXA2O43364 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HOXA2O43364 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA2O43364 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA2O43364 BCL2-203ENST00000589955 5011 ntBASIC19.2■□□□□ 0.66
HOXA2O43364 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA2O43364 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA2O43364 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
HOXA2O43364 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA2O43364 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HOXA2O43364 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms