Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KPNA4O00629 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.91■□□□□ 0.3
KPNA4O00629 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.91■□□□□ 0.3
KPNA4O00629 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.91■□□□□ 0.3
KPNA4O00629 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KPNA4O00629 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KPNA4O00629 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KPNA4O00629 GPAT2P1-201ENST00000444924 1672 ntBASIC16.91■□□□□ 0.3
KPNA4O00629 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KPNA4O00629 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 AC096733.2-201ENST00000609937 1394 ntBASIC16.9■□□□□ 0.3
KPNA4O00629 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
KPNA4O00629 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 ABHD17AP1-201ENST00000358206 933 ntBASIC16.9■□□□□ 0.3
KPNA4O00629 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KPNA4O00629 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.9■□□□□ 0.3
KPNA4O00629 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.9■□□□□ 0.3
KPNA4O00629 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.9■□□□□ 0.3
KPNA4O00629 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.9■□□□□ 0.3
KPNA4O00629 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
KPNA4O00629 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 AL109659.2-201ENST00000606809 1674 ntBASIC16.9■□□□□ 0.3
KPNA4O00629 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KPNA4O00629 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KPNA4O00629 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KPNA4O00629 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
KPNA4O00629 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KPNA4O00629 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KPNA4O00629 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
KPNA4O00629 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
KPNA4O00629 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KPNA4O00629 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
KPNA4O00629 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.89■□□□□ 0.29
KPNA4O00629 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KPNA4O00629 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KPNA4O00629 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 AL023284.2-201ENST00000405850 579 ntBASIC16.89■□□□□ 0.29
KPNA4O00629 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 CRYGFP-201ENST00000418459 633 ntBASIC16.89■□□□□ 0.29
KPNA4O00629 MCCD1P1-208ENST00000445732 328 ntBASIC16.89■□□□□ 0.29
KPNA4O00629 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.89■□□□□ 0.29
KPNA4O00629 DGCR10-201ENST00000609839 495 ntBASIC16.89■□□□□ 0.29
KPNA4O00629 REXO1L10P-201ENST00000615707 1290 ntBASIC16.89■□□□□ 0.29
KPNA4O00629 REXO1L12P-201ENST00000622156 912 ntBASIC16.89■□□□□ 0.29
KPNA4O00629 AL049637.2-201ENST00000641778 930 ntBASIC16.89■□□□□ 0.29
KPNA4O00629 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
KPNA4O00629 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KPNA4O00629 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 MYLKP1-201ENST00000509077 1580 ntBASIC16.89■□□□□ 0.29
KPNA4O00629 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
KPNA4O00629 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KPNA4O00629 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KPNA4O00629 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KPNA4O00629 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KPNA4O00629 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.88■□□□□ 0.29
KPNA4O00629 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms