Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.22■□□□□ 0.35
RTCAO00442 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.22■□□□□ 0.35
RTCAO00442 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.22■□□□□ 0.35
RTCAO00442 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTCAO00442 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RTCAO00442 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.22■□□□□ 0.35
RTCAO00442 ZNF444P1-201ENST00000559497 298 ntBASIC17.22■□□□□ 0.35
RTCAO00442 AL049597.2-201ENST00000565575 961 ntBASIC17.22■□□□□ 0.35
RTCAO00442 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.22■□□□□ 0.35
RTCAO00442 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RTCAO00442 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RTCAO00442 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RTCAO00442 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTCAO00442 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTCAO00442 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.21■□□□□ 0.35
RTCAO00442 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RTCAO00442 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.21■□□□□ 0.35
RTCAO00442 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RTCAO00442 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.21■□□□□ 0.35
RTCAO00442 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.21■□□□□ 0.35
RTCAO00442 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTCAO00442 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.21■□□□□ 0.35
RTCAO00442 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.21■□□□□ 0.35
RTCAO00442 AC004263.2-201ENST00000617183 678 ntBASIC17.21■□□□□ 0.35
RTCAO00442 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTCAO00442 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTCAO00442 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.2■□□□□ 0.34
RTCAO00442 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.2■□□□□ 0.34
RTCAO00442 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
RTCAO00442 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.2■□□□□ 0.34
RTCAO00442 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RTCAO00442 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTCAO00442 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 MIR662-201ENST00000384847 95 ntBASIC17.2■□□□□ 0.34
RTCAO00442 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.2■□□□□ 0.34
RTCAO00442 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.2■□□□□ 0.34
RTCAO00442 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.2■□□□□ 0.34
RTCAO00442 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.2■□□□□ 0.34
RTCAO00442 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.2■□□□□ 0.34
RTCAO00442 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.2■□□□□ 0.34
RTCAO00442 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.2■□□□□ 0.34
RTCAO00442 LINC01238-205ENST00000567549 1107 ntBASIC17.2■□□□□ 0.34
RTCAO00442 NTF6B-201ENST00000591913 560 ntBASIC17.2■□□□□ 0.34
RTCAO00442 AC008687.5-201ENST00000593746 558 ntBASIC17.2■□□□□ 0.34
RTCAO00442 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.2■□□□□ 0.34
RTCAO00442 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RTCAO00442 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTCAO00442 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms