Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 MIR935-201ENST00000401179 91 ntBASIC17.7■□□□□ 0.42
VGLL3A8MV65 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 AC116050.2-201ENST00000612102 1779 ntBASIC17.7■□□□□ 0.42
VGLL3A8MV65 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC17.7■□□□□ 0.42
VGLL3A8MV65 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VGLL3A8MV65 ANO7L1-203ENST00000602586 1720 ntBASIC17.69■□□□□ 0.42
VGLL3A8MV65 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.69■□□□□ 0.42
VGLL3A8MV65 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 TSPY26P-201ENST00000476365 1326 ntBASIC17.69■□□□□ 0.42
VGLL3A8MV65 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VGLL3A8MV65 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VGLL3A8MV65 AC005840.4-201ENST00000541242 2494 ntBASIC17.69■□□□□ 0.42
VGLL3A8MV65 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 AC006449.5-201ENST00000610658 2098 ntBASIC17.68■□□□□ 0.42
VGLL3A8MV65 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.68■□□□□ 0.42
VGLL3A8MV65 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VGLL3A8MV65 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms