Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SMIM9A6NGZ8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SMIM9A6NGZ8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SMIM9A6NGZ8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SMIM9A6NGZ8 MST1L-201ENST00000442552 2185 ntBASIC13.07□□□□□ -0.32
SMIM9A6NGZ8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 AC093010.1-201ENST00000473625 1624 ntBASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 DUTP2-201ENST00000519164 463 ntBASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 RNF126P1-202ENST00000569893 925 ntBASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 IGHV3-41-201ENST00000613121 348 ntBASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SMIM9A6NGZ8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 PHGDH-209ENST00000641074 1780 ntBASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 TSSC2-201ENST00000450217 709 ntBASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 AC093677.2-201ENST00000600169 1863 ntBASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SMIM9A6NGZ8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.04□□□□□ -0.32
SMIM9A6NGZ8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms