Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AL024508.2-201ENST00000607749 1894 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 LINC02199-201ENST00000506655 2702 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AL023284.2-201ENST00000405850 579 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 MCCD1P1-208ENST00000445732 328 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AC091390.4-202ENST00000476426 537 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 PRKY-204ENST00000533551 1019 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AC105036.2-201ENST00000569468 176 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AC008622.2-201ENST00000617006 1229 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AC131212.4-201ENST00000623606 975 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AC132938.6-201ENST00000623828 1655 ntBASIC12.72□□□□□ -0.37
LINC01546A6NGU7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LINC01546A6NGU7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 AC036111.1-201ENST00000533973 1582 ntBASIC12.71□□□□□ -0.37
LINC01546A6NGU7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01546A6NGU7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms