Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 AC006058.3-201ENST00000606217 1069 ntBASIC19.57■□□□□ 0.72
CCDC66A2RUB6 AC011298.2-201ENST00000617989 482 ntBASIC19.57■□□□□ 0.72
CCDC66A2RUB6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 AL031985.4-201ENST00000642138 673 ntBASIC19.57■□□□□ 0.72
CCDC66A2RUB6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 RCC2P3-201ENST00000418112 1537 ntBASIC19.56■□□□□ 0.72
CCDC66A2RUB6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 FAM201B-201ENST00000458407 597 ntBASIC19.56■□□□□ 0.72
CCDC66A2RUB6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC66A2RUB6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC66A2RUB6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 AC130371.2-201ENST00000619443 611 ntBASIC19.54■□□□□ 0.72
CCDC66A2RUB6 CR392000.1-201ENST00000624770 1228 ntBASIC19.54■□□□□ 0.72
CCDC66A2RUB6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 FLJ38576-201ENST00000623820 2459 ntBASIC19.54■□□□□ 0.72
CCDC66A2RUB6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms