Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LOC102724428A0A0B4J2F2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
LOC102724428A0A0B4J2F2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
LOC102724428A0A0B4J2F2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 HTR5BP-201ENST00000430851 1154 ntBASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 AC103564.2-201ENST00000432853 1299 ntBASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 AC108073.2-201ENST00000464002 357 ntBASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 AC018845.2-201ENST00000568326 409 ntBASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 C20orf181-201ENST00000623918 480 ntBASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.83■■□□□ 1.25
LOC102724428A0A0B4J2F2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LOC102724428A0A0B4J2F2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.83■■□□□ 1.24
LOC102724428A0A0B4J2F2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
LOC102724428A0A0B4J2F2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 VN2R19P-201ENST00000442399 1052 ntBASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 HCG4B-203ENST00000450128 991 ntBASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 ESPNP-201ENST00000270691 2015 ntBASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LOC102724428A0A0B4J2F2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 COX5BP2-201ENST00000392354 334 ntBASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 AL020989.1-201ENST00000422979 469 ntBASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 MIR3197-201ENST00000582241 73 ntBASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 AL513190.1-201ENST00000621254 727 ntBASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 ANO7L1-203ENST00000602586 1720 ntBASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LOC102724428A0A0B4J2F2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 MIR4751-201ENST00000578027 74 ntBASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LOC102724428A0A0B4J2F2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 CNN2P11-201ENST00000429351 262 ntBASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 IGHV3-65-201ENST00000523210 341 ntBASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 AL353593.2-201ENST00000602529 1483 ntBASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 AC148477.5-201ENST00000625164 1645 ntBASIC22.79■■□□□ 1.24
LOC102724428A0A0B4J2F2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms