Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 AC008608.2-201ENST00000606089 416 ntBASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 AC022898.2-201ENST00000616822 1312 ntBASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 HTR7P1-202ENST00000624664 4411 ntBASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 AC106795.1-205ENST00000512851 1056 ntBASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 SLC25A6P4-201ENST00000586535 553 ntBASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV5A0A0B4J1U4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 AC079776.4-201ENST00000511039 504 ntBASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV5A0A0B4J1U4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms