Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RPSAP43-201ENST00000402237 625 ntBASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 GPX1P2-201ENST00000429271 606 ntBASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 UNC93B6-202ENST00000528242 690 ntBASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 AC097374.2-201ENST00000618617 1306 ntBASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 AC005332.7-201ENST00000614046 2005 ntBASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 YBX2P1-201ENST00000394192 760 ntBASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 AC079781.4-201ENST00000641908 219 ntBASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 AP002414.3-201ENST00000589352 1468 ntBASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC187A0A096LP49 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 AL499627.1-201ENST00000569373 2188 ntBASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 MIR1199-201ENST00000621445 119 ntBASIC17.02■□□□□ 0.32
CCDC187A0A096LP49 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC187A0A096LP49 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC187A0A096LP49 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC187A0A096LP49 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC187A0A096LP49 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC187A0A096LP49 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC187A0A096LP49 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC187A0A096LP49 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 AC007967.3-201ENST00000434308 558 ntBASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 AL022326.1-202ENST00000641533 845 ntBASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms