Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 MIR4281-201ENST00000580852 62 ntBASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 THA1P-201ENST00000590384 1145 ntBASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 MYC-208ENST00000641036 567 ntBASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AL499627.1-201ENST00000569373 2188 ntBASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AC022532.1-201ENST00000624563 1728 ntBASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 DUX4L11-201ENST00000611504 1267 ntBASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 DUX4L12-201ENST00000614593 1267 ntBASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 DUX4L14-201ENST00000621227 1267 ntBASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms