Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA3PQ9Y6N3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCA3PQ9Y6N3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 MIR662-201ENST00000384847 95 ntBASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 PCED1CP-201ENST00000419887 785 ntBASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 KRT18P48-201ENST00000434763 852 ntBASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 AL358472.4-201ENST00000633140 710 ntBASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCA3PQ9Y6N3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 AC005332.1-201ENST00000577698 1310 ntBASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 AP000550.4-202ENST00000639755 178 ntBASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCA3PQ9Y6N3 AL162741.1-201ENST00000565563 1558 ntBASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 IER3-202ENST00000376377 1350 ntBASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCA3PQ9Y6N3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms