Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 AC134684.3-201ENST00000641758 218 ntBASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 LINC00602-201ENST00000629776 2065 ntBASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 RPS8P6-201ENST00000426177 609 ntBASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA1Q9Y5H4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA1Q9Y5H4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 AC009947.1-201ENST00000444350 727 ntBASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 AC112698.1-201ENST00000510299 916 ntBASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 AP002414.3-201ENST00000589352 1468 ntBASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA1Q9Y5H4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms