Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 AC090340.1-201ENST00000620778 4980 ntBASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 FAAHP1-202ENST00000446499 1238 ntBASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 IFNL4P1-201ENST00000607083 540 ntBASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 AL157888.1-201ENST00000631930 593 ntBASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 FLJ13224-201ENST00000313737 1514 ntBASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB1Q9Y5F3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 AC093010.1-201ENST00000473625 1624 ntBASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 AC138028.4-201ENST00000564984 1845 ntBASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 AC079602.3-201ENST00000623931 403 ntBASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB1Q9Y5F3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 AC009078.2-202ENST00000463353 338 ntBASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 KRT8P26-201ENST00000534154 1276 ntBASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 AL732292.2-201ENST00000609649 430 ntBASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB1Q9Y5F3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms