Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 AC079776.2-201ENST00000641154 1609 ntBASIC23.48■■□□□ 1.35
SPG7Q9UQ90 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 LAGE3P1-201ENST00000425356 484 ntBASIC23.48■■□□□ 1.35
SPG7Q9UQ90 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 AP002414.3-201ENST00000589352 1468 ntBASIC23.48■■□□□ 1.35
SPG7Q9UQ90 PMPCAP1-201ENST00000508114 1576 ntBASIC23.48■■□□□ 1.35
SPG7Q9UQ90 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.48■■□□□ 1.35
SPG7Q9UQ90 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 AC122714.2-201ENST00000502787 707 ntBASIC23.47■■□□□ 1.35
SPG7Q9UQ90 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.47■■□□□ 1.35
SPG7Q9UQ90 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 AC005104.2-201ENST00000427818 678 ntBASIC23.46■■□□□ 1.35
SPG7Q9UQ90 KRT18P3-201ENST00000451602 1288 ntBASIC23.46■■□□□ 1.35
SPG7Q9UQ90 AC092183.1-201ENST00000469884 875 ntBASIC23.46■■□□□ 1.35
SPG7Q9UQ90 BX005266.1-201ENST00000473402 457 ntBASIC23.46■■□□□ 1.35
SPG7Q9UQ90 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 UNC93B6-202ENST00000528242 690 ntBASIC23.46■■□□□ 1.35
SPG7Q9UQ90 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
SPG7Q9UQ90 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
SPG7Q9UQ90 AC010460.3-201ENST00000511359 1579 ntBASIC23.45■■□□□ 1.34
SPG7Q9UQ90 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms