Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DENND2AQ9ULE3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
DENND2AQ9ULE3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.81■■□□□ 1.08
DENND2AQ9ULE3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
DENND2AQ9ULE3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
DENND2AQ9ULE3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DENND2AQ9ULE3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.81■■□□□ 1.08
DENND2AQ9ULE3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 AL662844.1-201ENST00000546340 181 ntBASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DENND2AQ9ULE3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DENND2AQ9ULE3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
DENND2AQ9ULE3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DENND2AQ9ULE3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms