Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 FAM86EP-206ENST00000510506 987 ntBASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 VENTXP5-201ENST00000523979 775 ntBASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 LINC01126-201ENST00000623515 1646 ntBASIC18.82■□□□□ 0.6
PPARGC1AQ9UBK2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 ARMC10P1-201ENST00000313754 855 ntBASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 AC099343.3-201ENST00000605834 2503 ntBASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 AL162741.1-201ENST00000565563 1558 ntBASIC18.81■□□□□ 0.6
PPARGC1AQ9UBK2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 ESPNP-201ENST00000270691 2015 ntBASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 KRT18P48-201ENST00000434763 852 ntBASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 AC113404.2-201ENST00000507884 177 ntBASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
PPARGC1AQ9UBK2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms