Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 ELK2BP-201ENST00000415014 1224 ntBASIC19.02■□□□□ 0.64
CHD7Q9P2D1 AC008687.5-201ENST00000593746 558 ntBASIC19.02■□□□□ 0.64
CHD7Q9P2D1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.02■□□□□ 0.64
CHD7Q9P2D1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CHD7Q9P2D1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 AL161938.1-201ENST00000569833 2180 ntBASIC19.01■□□□□ 0.63
CHD7Q9P2D1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.01■□□□□ 0.63
CHD7Q9P2D1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CHD7Q9P2D1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19■□□□□ 0.63
CHD7Q9P2D1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19■□□□□ 0.63
CHD7Q9P2D1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19■□□□□ 0.63
CHD7Q9P2D1 AC022145.2-201ENST00000598203 171 ntBASIC19■□□□□ 0.63
CHD7Q9P2D1 AL589182.2-201ENST00000619332 1049 ntBASIC19■□□□□ 0.63
CHD7Q9P2D1 AL513210.1-201ENST00000629608 234 ntBASIC19■□□□□ 0.63
CHD7Q9P2D1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19■□□□□ 0.63
CHD7Q9P2D1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19■□□□□ 0.63
CHD7Q9P2D1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19■□□□□ 0.63
CHD7Q9P2D1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19■□□□□ 0.63
CHD7Q9P2D1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19■□□□□ 0.63
CHD7Q9P2D1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19■□□□□ 0.63
CHD7Q9P2D1 AC091812.2-201ENST00000619081 385 ntBASIC19■□□□□ 0.63
CHD7Q9P2D1 AC092902.6-201ENST00000641783 218 ntBASIC19■□□□□ 0.63
CHD7Q9P2D1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19■□□□□ 0.63
CHD7Q9P2D1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CHD7Q9P2D1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 ADH5P3-201ENST00000433842 1137 ntBASIC18.99■□□□□ 0.63
CHD7Q9P2D1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 AL022326.1-202ENST00000641533 845 ntBASIC18.99■□□□□ 0.63
CHD7Q9P2D1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms