Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 CYP2D8P-201ENST00000433633 1490 ntBASIC15.04■□□□□ -0
LIN7CQ9NUP9 KRT8P9-201ENST00000558927 1449 ntBASIC15.04■□□□□ -0
LIN7CQ9NUP9 LINC01568-207ENST00000641790 1380 ntBASIC15.04■□□□□ -0
LIN7CQ9NUP9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 KRT18P22-201ENST00000402024 1347 ntBASIC15.04■□□□□ -0
LIN7CQ9NUP9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 AC145285.6-201ENST00000604632 637 ntBASIC15.04■□□□□ -0
LIN7CQ9NUP9 AC010653.2-201ENST00000623505 997 ntBASIC15.04■□□□□ -0
LIN7CQ9NUP9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIN7CQ9NUP9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LIN7CQ9NUP9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 SIRPAP1-201ENST00000448467 1770 ntBASIC15.03■□□□□ -0
LIN7CQ9NUP9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.03■□□□□ -0
LIN7CQ9NUP9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 AL353719.1-201ENST00000566847 864 ntBASIC15.03■□□□□ -0
LIN7CQ9NUP9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 AC133561.5-201ENST00000635547 218 ntBASIC15.03■□□□□ -0
LIN7CQ9NUP9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LIN7CQ9NUP9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIN7CQ9NUP9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 KRT8P50-201ENST00000562022 1438 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms