Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 AL353692.3-201ENST00000407031 1396 ntBASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 KRT18P65-201ENST00000439811 1286 ntBASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 REXO1L9P-201ENST00000604264 2108 ntBASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRDM9Q9NQV7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 HCG11-201ENST00000411553 5696 ntBASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AC004263.2-201ENST00000617183 678 ntBASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRDM9Q9NQV7 AC016734.2-201ENST00000624325 1377 ntBASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 AC132938.6-201ENST00000623828 1655 ntBASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 TSSC2-201ENST00000450217 709 ntBASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms