Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 EDA-201ENST00000338901 1233 ntBASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 AL356441.2-201ENST00000443009 864 ntBASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 TERF1P5-201ENST00000477545 1207 ntBASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 C2orf69P4-201ENST00000565394 541 ntBASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.89■□□□□ 0.3
VCX3AQ9NNX9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VCX3AQ9NNX9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
VCX3AQ9NNX9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
VCX3AQ9NNX9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 AC026691.1-201ENST00000602502 2017 ntBASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 AL035685.1-201ENST00000636663 812 ntBASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3AQ9NNX9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 AC007326.2-201ENST00000624224 7579 ntBASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 AGGF1P2-201ENST00000426656 2106 ntBASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 AC106886.4-201ENST00000623557 2502 ntBASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3AQ9NNX9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms