Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL13Q99616 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL13Q99616 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL13Q99616 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCL13Q99616 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL13Q99616 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL13Q99616 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL13Q99616 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL13Q99616 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 AC113404.2-201ENST00000507884 177 ntBASIC15.13■□□□□ 0.01
CCL13Q99616 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL13Q99616 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL13Q99616 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL13Q99616 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL13Q99616 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 AL353692.3-201ENST00000407031 1396 ntBASIC15.12■□□□□ 0.01
CCL13Q99616 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 TSPY22P-201ENST00000427496 604 ntBASIC15.12■□□□□ 0.01
CCL13Q99616 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL13Q99616 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL13Q99616 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL13Q99616 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 AL390719.2-201ENST00000606993 987 ntBASIC15.12■□□□□ 0.01
CCL13Q99616 AC116407.4-201ENST00000623319 1061 ntBASIC15.12■□□□□ 0.01
CCL13Q99616 AP000550.4-202ENST00000639755 178 ntBASIC15.12■□□□□ 0.01
CCL13Q99616 AC093010.1-201ENST00000473625 1624 ntBASIC15.12■□□□□ 0.01
CCL13Q99616 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL13Q99616 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL13Q99616 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 AL354751.1-201ENST00000412768 1863 ntBASIC15.12■□□□□ 0.01
CCL13Q99616 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL13Q99616 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL13Q99616 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL13Q99616 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
CCL13Q99616 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL13Q99616 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL13Q99616 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL13Q99616 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL13Q99616 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL13Q99616 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCL13Q99616 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL13Q99616 AL390961.4-201ENST00000623958 2535 ntBASIC15.11■□□□□ 0.01
CCL13Q99616 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL13Q99616 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms