Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 AC126763.1-201ENST00000552015 2118 ntBASIC18.7■□□□□ 0.58
NUDCD1Q96RS6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 AL157888.1-201ENST00000631930 593 ntBASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 AC073592.3-201ENST00000625118 1834 ntBASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD1Q96RS6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 ABALON-201ENST00000629058 1903 ntBASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 FAM8A6P-201ENST00000407496 1135 ntBASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 RASA4DP-201ENST00000460726 1199 ntBASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 AC022616.7-201ENST00000525383 220 ntBASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD1Q96RS6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 MIR149-201ENST00000384879 89 ntBASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 SPDYE15P-201ENST00000424157 909 ntBASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 AC092647.4-201ENST00000457211 535 ntBASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 AL049597.2-201ENST00000565575 961 ntBASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD1Q96RS6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NUDCD1Q96RS6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms