Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KRT8P26-201ENST00000534154 1276 ntBASIC15.02■□□□□ -0
GAFA1Q96PS6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.02■□□□□ -0
GAFA1Q96PS6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.02■□□□□ -0
GAFA1Q96PS6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GAFA1Q96PS6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.02■□□□□ -0
GAFA1Q96PS6 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.02■□□□□ -0
GAFA1Q96PS6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GAFA1Q96PS6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AC022898.2-201ENST00000616822 1312 ntBASIC15.01□□□□□ -0.01
GAFA1Q96PS6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 BX276092.5-203ENST00000456199 560 ntBASIC15.01□□□□□ -0.01
GAFA1Q96PS6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AL121672.3-201ENST00000608644 468 ntBASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AC091076.1-201ENST00000610741 619 ntBASIC15.01□□□□□ -0.01
GAFA1Q96PS6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GAFA1Q96PS6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15□□□□□ -0.01
GAFA1Q96PS6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
GAFA1Q96PS6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
GAFA1Q96PS6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15□□□□□ -0.01
GAFA1Q96PS6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15□□□□□ -0.01
GAFA1Q96PS6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15□□□□□ -0.01
GAFA1Q96PS6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
GAFA1Q96PS6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15□□□□□ -0.01
GAFA1Q96PS6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15□□□□□ -0.01
GAFA1Q96PS6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
GAFA1Q96PS6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
GAFA1Q96PS6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GAFA1Q96PS6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms