Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 MTDHP1-201ENST00000605323 784 ntBASIC13.82□□□□□ -0.2
LINC00479Q96M42 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 AC008622.2-201ENST00000617006 1229 ntBASIC13.82□□□□□ -0.2
LINC00479Q96M42 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00479Q96M42 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
LINC00479Q96M42 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 CKBP1-201ENST00000565489 1086 ntBASIC13.81□□□□□ -0.2
LINC00479Q96M42 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LINC00479Q96M42 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00479Q96M42 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 OR6D1P-203ENST00000641209 4860 ntBASIC13.8□□□□□ -0.2
LINC00479Q96M42 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 AC004951.3-201ENST00000418645 1148 ntBASIC13.8□□□□□ -0.2
LINC00479Q96M42 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.8□□□□□ -0.2
LINC00479Q96M42 KRT16P5-201ENST00000455284 522 ntBASIC13.8□□□□□ -0.2
LINC00479Q96M42 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 AL023875.1-201ENST00000640777 796 ntBASIC13.8□□□□□ -0.2
LINC00479Q96M42 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms