Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 KRT18P57-201ENST00000443599 1254 ntBASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 AC024563.2-201ENST00000603282 481 ntBASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 KRT89P-201ENST00000620027 1478 ntBASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 AC006116.8-202ENST00000587620 1550 ntBASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDF1Q96CC6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 LINC00602-201ENST00000629776 2065 ntBASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 HLA-F-220ENST00000434407 884 ntBASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 AC012317.2-201ENST00000623305 2251 ntBASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDF1Q96CC6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RHBDF1Q96CC6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RHBDF1Q96CC6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.58■□□□□ 0.41
RHBDF1Q96CC6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RHBDF1Q96CC6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RHBDF1Q96CC6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RHBDF1Q96CC6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RHBDF1Q96CC6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RHBDF1Q96CC6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 AC006011.2-201ENST00000621313 1158 ntBASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.58■□□□□ 0.4
RHBDF1Q96CC6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms