Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 AKR1C7P-201ENST00000305623 895 ntBASIC18.9■□□□□ 0.62
USP13Q92995 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
USP13Q92995 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.9■□□□□ 0.62
USP13Q92995 AP002469.2-201ENST00000531724 424 ntBASIC18.9■□□□□ 0.62
USP13Q92995 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.9■□□□□ 0.62
USP13Q92995 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.9■□□□□ 0.62
USP13Q92995 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.9■□□□□ 0.62
USP13Q92995 AL121912.1-201ENST00000603683 238 ntBASIC18.9■□□□□ 0.62
USP13Q92995 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.9■□□□□ 0.62
USP13Q92995 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
USP13Q92995 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP13Q92995 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.9■□□□□ 0.62
USP13Q92995 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.9■□□□□ 0.62
USP13Q92995 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USP13Q92995 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
USP13Q92995 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.89■□□□□ 0.62
USP13Q92995 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP13Q92995 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP13Q92995 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.89■□□□□ 0.62
USP13Q92995 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP13Q92995 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP13Q92995 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.89■□□□□ 0.61
USP13Q92995 AP000347.1-202ENST00000435868 847 ntBASIC18.89■□□□□ 0.61
USP13Q92995 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.89■□□□□ 0.61
USP13Q92995 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.89■□□□□ 0.61
USP13Q92995 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.89■□□□□ 0.61
USP13Q92995 AC008687.5-201ENST00000593746 558 ntBASIC18.89■□□□□ 0.61
USP13Q92995 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.89■□□□□ 0.61
USP13Q92995 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP13Q92995 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.89■□□□□ 0.61
USP13Q92995 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP13Q92995 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.89■□□□□ 0.61
USP13Q92995 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP13Q92995 AC104581.1-202ENST00000635932 2618 ntBASIC18.88■□□□□ 0.61
USP13Q92995 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.88■□□□□ 0.61
USP13Q92995 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.88■□□□□ 0.61
USP13Q92995 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
USP13Q92995 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USP13Q92995 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.88■□□□□ 0.61
USP13Q92995 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
USP13Q92995 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.88■□□□□ 0.61
USP13Q92995 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.88■□□□□ 0.61
USP13Q92995 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.88■□□□□ 0.61
USP13Q92995 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.88■□□□□ 0.61
USP13Q92995 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.88■□□□□ 0.61
USP13Q92995 BNIP3P18-201ENST00000593976 575 ntBASIC18.88■□□□□ 0.61
USP13Q92995 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.88■□□□□ 0.61
USP13Q92995 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.88■□□□□ 0.61
USP13Q92995 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
USP13Q92995 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP13Q92995 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP13Q92995 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP13Q92995 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP13Q92995 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP13Q92995 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP13Q92995 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.87■□□□□ 0.61
USP13Q92995 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.87■□□□□ 0.61
USP13Q92995 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP13Q92995 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.87■□□□□ 0.61
USP13Q92995 AC106795.1-205ENST00000512851 1056 ntBASIC18.87■□□□□ 0.61
USP13Q92995 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.87■□□□□ 0.61
USP13Q92995 SLC25A6P4-201ENST00000586535 553 ntBASIC18.87■□□□□ 0.61
USP13Q92995 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.87■□□□□ 0.61
USP13Q92995 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.87■□□□□ 0.61
USP13Q92995 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.87■□□□□ 0.61
USP13Q92995 REXO1L6P-202ENST00000619970 1078 ntBASIC18.87■□□□□ 0.61
USP13Q92995 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.87■□□□□ 0.61
USP13Q92995 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms