Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC099398.1-201ENST00000567919 2776 ntBASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 KRT18P41-201ENST00000518924 1277 ntBASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 PCDHA12-202ENST00000613593 2588 ntBASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 FITM1-202ENST00000559294 800 ntBASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 GMCL1P1-201ENST00000463439 1581 ntBASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4IP1Q8WWV3 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 MIR1238-201ENST00000408483 83 ntBASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 AC108860.2-201ENST00000562760 2183 ntBASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTN4IP1Q8WWV3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 AC106820.2-201ENST00000563775 3264 ntBASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms