Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF139Q8WU17 KRT18P1-202ENST00000452408 1331 ntBASIC18.95■□□□□ 0.62
RNF139Q8WU17 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF139Q8WU17 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 LINC00602-201ENST00000629776 2065 ntBASIC18.94■□□□□ 0.62
RNF139Q8WU17 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 TSPY12P-201ENST00000421279 868 ntBASIC18.94■□□□□ 0.62
RNF139Q8WU17 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 ATP5G2P1-201ENST00000433580 426 ntBASIC18.94■□□□□ 0.62
RNF139Q8WU17 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.94■□□□□ 0.62
RNF139Q8WU17 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF139Q8WU17 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF139Q8WU17 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.93■□□□□ 0.62
RNF139Q8WU17 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms