Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 KRT18P65-201ENST00000439811 1286 ntBASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 AC132008.2-207ENST00000454517 770 ntBASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 TP73-AS1-207ENST00000624167 988 ntBASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.7■□□□□ 0.58
SH3RF2Q8TEC5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 GMCL1P1-201ENST00000463439 1581 ntBASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SH3RF2Q8TEC5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 AC007613.1-201ENST00000572811 2597 ntBASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 AC009533.2-201ENST00000543664 586 ntBASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 AC126763.1-201ENST00000552015 2118 ntBASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF2Q8TEC5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms