Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PCED1CP-201ENST00000419887 785 ntBASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 AC011498.5-201ENST00000592027 486 ntBASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 AC116407.4-201ENST00000623319 1061 ntBASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 AL390961.4-201ENST00000623958 2535 ntBASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 KRT18P65-201ENST00000439811 1286 ntBASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 IER3-202ENST00000376377 1350 ntBASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC148Q8NFR7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 FLJ13224-201ENST00000313737 1514 ntBASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 TSPY12P-201ENST00000421279 868 ntBASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 TSPY22P-201ENST00000427496 604 ntBASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 DUTP2-201ENST00000519164 463 ntBASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 AP000550.4-202ENST00000639755 178 ntBASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC148Q8NFR7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms