Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 AC233702.3-201ENST00000578656 1387 ntBASIC20.46■□□□□ 0.87
RETREG2Q8NC44 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 GUSBP12-201ENST00000513727 720 ntBASIC20.45■□□□□ 0.86
RETREG2Q8NC44 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 GPR32P1-201ENST00000601788 811 ntBASIC20.45■□□□□ 0.86
RETREG2Q8NC44 AL121912.1-201ENST00000603683 238 ntBASIC20.45■□□□□ 0.86
RETREG2Q8NC44 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETREG2Q8NC44 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 AL353801.3-201ENST00000609898 542 ntBASIC20.44■□□□□ 0.86
RETREG2Q8NC44 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETREG2Q8NC44 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 AC106795.1-205ENST00000512851 1056 ntBASIC20.43■□□□□ 0.86
RETREG2Q8NC44 AC023511.2-201ENST00000618803 211 ntBASIC20.43■□□□□ 0.86
RETREG2Q8NC44 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.43■□□□□ 0.86
RETREG2Q8NC44 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 VENTXP7-201ENST00000475503 772 ntBASIC20.42■□□□□ 0.86
RETREG2Q8NC44 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms