Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 HNRNPDP1-201ENST00000439535 754 ntBASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 MTCL1P1-201ENST00000446207 792 ntBASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 SCARNA2-201ENST00000458748 420 ntBASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 POLD2P1-201ENST00000511220 997 ntBASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 AL138831.2-201ENST00000606564 490 ntBASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 INTS4P1-201ENST00000438455 1935 ntBASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 RPL13AP23-201ENST00000480739 586 ntBASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
COLGALT1Q8NBJ5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 AC011467.2-201ENST00000598425 242 ntBASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COLGALT1Q8NBJ5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 AL031598.1-201ENST00000561511 1773 ntBASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 AC092865.5-201ENST00000545435 363 ntBASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.4■□□□□ 0.7
COLGALT1Q8NBJ5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms