Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.145e-6■□□□□ 9.5
SND1Q7KZF4 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC13.52□□□□□ -0.255e-6■□□□□ 9.5
SND1Q7KZF4 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.425e-6■□□□□ 9.5
SND1Q7KZF4 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.515e-6■□□□□ 9.5
SND1Q7KZF4 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.75e-6■□□□□ 9.5
SND1Q7KZF4 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC9.84□□□□□ -0.835e-6■□□□□ 9.5
SND1Q7KZF4 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.915e-6■□□□□ 9.5
SND1Q7KZF4 ARSB-205ENST00000521800 1082 ntTSL 28.32□□□□□ -1.085e-6■□□□□ 9.5
SND1Q7KZF4 ADGRG6-208ENST00000472054 1247 ntTSL 27.87□□□□□ -1.155e-6■□□□□ 9.5
SND1Q7KZF4 POR-205ENST00000418341 736 ntTSL 46.9□□□□□ -1.34e-10■□□□□ 9.5
SND1Q7KZF4 POR-214ENST00000449920 283 ntTSL 55.67□□□□□ -1.54e-10■□□□□ 9.5
SND1Q7KZF4 GYPA-207ENST00000510771 709 ntTSL 39.61□□□□□ -0.871e-6■□□□□ 9.5
SND1Q7KZF4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.598e-13■□□□□ 9.5
SND1Q7KZF4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.38e-13■□□□□ 9.5
SND1Q7KZF4 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.178e-13■□□□□ 9.5
SND1Q7KZF4 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.178e-13■□□□□ 9.5
SND1Q7KZF4 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.428e-13■□□□□ 9.5
SND1Q7KZF4 CEACAM1-206ENST00000403136 1778 ntTSL 1 (best)13.87□□□□□ -0.196e-9■□□□□ 9.5
SND1Q7KZF4 SLC50A1-205ENST00000465546 538 ntTSL 314.87□□□□□ -0.032e-8■□□□□ 9.4
SND1Q7KZF4 SLC50A1-206ENST00000475824 770 ntTSL 511.8□□□□□ -0.522e-8■□□□□ 9.4
SND1Q7KZF4 MGST3-213ENST00000609263 3101 nt6.87□□□□□ -1.314e-9■□□□□ 9.4
SND1Q7KZF4 MGST3-210ENST00000488688 741 ntTSL 25.79□□□□□ -1.484e-9■□□□□ 9.4
SND1Q7KZF4 LTBP4-212ENST00000595118 2446 ntTSL 219.1■□□□□ 0.653e-6■□□□□ 9.4
SND1Q7KZF4 LTBP4-204ENST00000318809 1700 ntTSL 218.19■□□□□ 0.53e-6■□□□□ 9.4
SND1Q7KZF4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.95■■□□□ 1.742e-7■□□□□ 9.4
SND1Q7KZF4 HSD17B12-212ENST00000636722 540 ntTSL 420.66■□□□□ 0.92e-7■□□□□ 9.4
SND1Q7KZF4 LAMB1-206ENST00000468518 595 ntTSL 214.71□□□□□ -0.051e-7■□□□□ 9.4
SND1Q7KZF4 ELOVL6-205ENST00000506625 610 ntTSL 410.33□□□□□ -0.768e-7■□□□□ 9.4
SND1Q7KZF4 ELOVL6-206ENST00000507451 506 ntTSL 27.11□□□□□ -1.278e-7■□□□□ 9.4
SND1Q7KZF4 AC124068.2-201ENST00000569473 1109 ntBASIC15.11■□□□□ 0.012e-70■□□□□ 9.4
SND1Q7KZF4 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)16.2■□□□□ 0.184e-8■□□□□ 9.4
SND1Q7KZF4 IGF1R-207ENST00000558898 1034 ntTSL 513.28□□□□□ -0.284e-8■□□□□ 9.4
SND1Q7KZF4 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.484e-8■□□□□ 9.4
SND1Q7KZF4 IGF1R-209ENST00000559582 567 ntTSL 410.07□□□□□ -0.84e-8■□□□□ 9.4
SND1Q7KZF4 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.974e-8■□□□□ 9.4
SND1Q7KZF4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.327e-6■□□□□ 9.4
SND1Q7KZF4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.4■□□□□ 0.72e-6■□□□□ 9.4
SND1Q7KZF4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.432e-6■□□□□ 9.4
SND1Q7KZF4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.362e-6■□□□□ 9.4
SND1Q7KZF4 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.62e-6■□□□□ 9.4
SND1Q7KZF4 KPNB1-207ENST00000579901 594 ntTSL 49.87□□□□□ -0.832e-6■□□□□ 9.4
SND1Q7KZF4 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC9.81□□□□□ -0.842e-6■□□□□ 9.4
SND1Q7KZF4 KPNB1-211ENST00000582097 2347 ntTSL 28.97□□□□□ -0.972e-6■□□□□ 9.4
SND1Q7KZF4 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.56□□□□□ -1.042e-6■□□□□ 9.4
SND1Q7KZF4 KPNB1-213ENST00000583013 742 ntTSL 38.35□□□□□ -1.072e-6■□□□□ 9.4
SND1Q7KZF4 KPNB1-206ENST00000578718 550 ntTSL 36.58□□□□□ -1.362e-6■□□□□ 9.4
SND1Q7KZF4 EIF5-211ENST00000559532 678 ntTSL 425.48■■□□□ 1.672e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-209ENST00000559130 583 ntTSL 322.22■■□□□ 1.152e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.772e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-215ENST00000560763 723 ntTSL 219.45■□□□□ 0.72e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-214ENST00000560338 580 ntTSL 317.52■□□□□ 0.42e-11■□□□□ 9.4
SND1Q7KZF4 ANP32A-211ENST00000561430 508 ntTSL 217.27■□□□□ 0.362e-11■□□□□ 9.4
SND1Q7KZF4 ANP32A-202ENST00000409628 2001 ntTSL 516.94■□□□□ 0.32e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-210ENST00000559249 704 ntTSL 216.93■□□□□ 0.32e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.22e-11■□□□□ 9.4
SND1Q7KZF4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.192e-11■□□□□ 9.4
SND1Q7KZF4 ANP32A-201ENST00000267918 1084 ntTSL 315.51■□□□□ 0.072e-11■□□□□ 9.4
SND1Q7KZF4 ANP32A-204ENST00000480858 352 ntTSL 1 (best)15.37■□□□□ 0.052e-11■□□□□ 9.4
SND1Q7KZF4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.012e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-203ENST00000558265 872 ntTSL 514.29□□□□□ -0.122e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.192e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-204ENST00000558316 719 ntTSL 313.6□□□□□ -0.232e-11■□□□□ 9.4
SND1Q7KZF4 ANP32A-206ENST00000483551 3711 ntTSL 510.12□□□□□ -0.792e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-213ENST00000560200 776 ntTSL 59.43□□□□□ -0.92e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-218ENST00000561325 569 ntTSL 46.82□□□□□ -1.322e-11■□□□□ 9.4
SND1Q7KZF4 VDAC3-212ENST00000524291 533 ntTSL 26.23□□□□□ -1.412e-11■□□□□ 9.4
SND1Q7KZF4 EIF5-206ENST00000558551 744 ntTSL 25.85□□□□□ -1.472e-11■□□□□ 9.4
SND1Q7KZF4 ATP5G2-203ENST00000495596 1976 ntTSL 1 (best)14.02□□□□□ -0.168e-18■□□□□ 9.4
SND1Q7KZF4 EIF4A1-227ENST00000583217 599 ntTSL 29.59□□□□□ -0.877e-13■□□□□ 9.4
SND1Q7KZF4 EIF4A1-210ENST00000578569 583 ntTSL 27.56□□□□□ -1.27e-13■□□□□ 9.4
SND1Q7KZF4 ATP5B-208ENST00000551182 457 ntTSL 27.21□□□□□ -1.263e-18■□□□□ 9.4
SND1Q7KZF4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.62e-7■□□□□ 9.4
SND1Q7KZF4 ACAT2-202ENST00000467951 856 ntTSL 316.9■□□□□ 0.32e-7■□□□□ 9.4
SND1Q7KZF4 YARS-209ENST00000490826 2178 ntTSL 214.95□□□□□ -0.028e-10■□□□□ 9.4
SND1Q7KZF4 YARS-208ENST00000487404 2197 ntTSL 212.18□□□□□ -0.468e-10■□□□□ 9.4
SND1Q7KZF4 YARS-206ENST00000478828 1044 ntTSL 211.7□□□□□ -0.548e-10■□□□□ 9.4
SND1Q7KZF4 YARS-203ENST00000469100 2247 ntTSL 211.68□□□□□ -0.548e-10■□□□□ 9.4
SND1Q7KZF4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.082e-7■□□□□ 9.4
SND1Q7KZF4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.262e-7■□□□□ 9.4
SND1Q7KZF4 HMG20A-204ENST00000558288 3558 nt5.7□□□□□ -1.52e-7■□□□□ 9.4
SND1Q7KZF4 ALDOC-208ENST00000582381 571 ntTSL 213.63□□□□□ -0.231e-7■□□□□ 9.4
SND1Q7KZF4 ALDOC-206ENST00000578590 839 ntTSL 411.23□□□□□ -0.611e-7■□□□□ 9.4
SND1Q7KZF4 HLA-F-221ENST00000444621 495 nt11.53□□□□□ -0.562e-18■□□□□ 9.4
SND1Q7KZF4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.22■□□□□ 0.192e-27■□□□□ 9.3
SND1Q7KZF4 DHX9-207ENST00000485081 2531 ntTSL 212.56□□□□□ -0.41e-8■□□□□ 9.3
SND1Q7KZF4 DHX9-203ENST00000474446 848 ntTSL 36.37□□□□□ -1.391e-8■□□□□ 9.3
SND1Q7KZF4 SEMA3B-211ENST00000612509 1061 ntTSL 518.7■□□□□ 0.583e-7■□□□□ 9.3
SND1Q7KZF4 ACSL3-207ENST00000474422 760 ntTSL 38.48□□□□□ -1.051e-10■□□□□ 9.3
SND1Q7KZF4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.35■□□□□ 0.532e-38■□□□□ 9.3
SND1Q7KZF4 SLC2A1-209ENST00000630821 591 ntTSL 214.67□□□□□ -0.062e-38■□□□□ 9.3
SND1Q7KZF4 MPZL1-205ENST00000448405 1596 ntTSL 1 (best)24.29■■□□□ 1.483e-7■□□□□ 9.3
SND1Q7KZF4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.369e-6■□□□□ 9.3
SND1Q7KZF4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.89■■□□□ 1.259e-6■□□□□ 9.3
SND1Q7KZF4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.82■■□□□ 1.248e-10■□□□□ 9.3
SND1Q7KZF4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.133e-7■□□□□ 9.3
SND1Q7KZF4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.9■■□□□ 1.18e-10■□□□□ 9.3
SND1Q7KZF4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.058e-10■□□□□ 9.3
SND1Q7KZF4 CERS4-214ENST00000595722 1826 ntTSL 1 (best)21.14■□□□□ 0.978e-10■□□□□ 9.3
SND1Q7KZF4 TEX264-210ENST00000457927 1155 ntAPPRIS ALT2 TSL 520.45■□□□□ 0.868e-10■□□□□ 9.3
SND1Q7KZF4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.768e-10■□□□□ 9.3
Retrieved 100 of 13,567 protein–RNA pairs in 569.2 ms