Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAPH1Q70E73 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAPH1Q70E73 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAPH1Q70E73 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.18■□□□□ 0.5
RAPH1Q70E73 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAPH1Q70E73 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.18■□□□□ 0.5
RAPH1Q70E73 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAPH1Q70E73 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.17■□□□□ 0.5
RAPH1Q70E73 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 SLC25A1P2-201ENST00000430693 912 ntBASIC18.17■□□□□ 0.5
RAPH1Q70E73 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAPH1Q70E73 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAPH1Q70E73 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 KRT8P7-201ENST00000533003 1432 ntBASIC18.16■□□□□ 0.5
RAPH1Q70E73 HOXB1-202ENST00000577092 1414 ntBASIC18.16■□□□□ 0.5
RAPH1Q70E73 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 TSPY17P-201ENST00000450329 467 ntBASIC18.16■□□□□ 0.5
RAPH1Q70E73 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 AL353719.1-201ENST00000566847 864 ntBASIC18.16■□□□□ 0.5
RAPH1Q70E73 Z99916.2-201ENST00000604037 246 ntBASIC18.16■□□□□ 0.5
RAPH1Q70E73 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAPH1Q70E73 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
RAPH1Q70E73 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 CCR12P-201ENST00000446203 998 ntBASIC18.15■□□□□ 0.5
RAPH1Q70E73 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 CR769767.2-201ENST00000622735 460 ntBASIC18.15■□□□□ 0.5
RAPH1Q70E73 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAPH1Q70E73 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.15■□□□□ 0.5
RAPH1Q70E73 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms