Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RTL4Q6ZR62 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RTL4Q6ZR62 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.96■□□□□ 0.3
RTL4Q6ZR62 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.96■□□□□ 0.3
RTL4Q6ZR62 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTL4Q6ZR62 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RTL4Q6ZR62 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.96■□□□□ 0.3
RTL4Q6ZR62 KRT8P50-201ENST00000562022 1438 ntBASIC16.96■□□□□ 0.3
RTL4Q6ZR62 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 AL391807.1-203ENST00000604392 2365 ntBASIC16.95■□□□□ 0.3
RTL4Q6ZR62 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 AL162741.1-201ENST00000565563 1558 ntBASIC16.95■□□□□ 0.3
RTL4Q6ZR62 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 HLA-F-220ENST00000434407 884 ntBASIC16.95■□□□□ 0.3
RTL4Q6ZR62 SPDYE13P-201ENST00000445314 798 ntBASIC16.95■□□□□ 0.3
RTL4Q6ZR62 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 ABALON-201ENST00000629058 1903 ntBASIC16.95■□□□□ 0.3
RTL4Q6ZR62 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL4Q6ZR62 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 PVRIG2P-201ENST00000435460 978 ntBASIC16.94■□□□□ 0.3
RTL4Q6ZR62 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RTL4Q6ZR62 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms