Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 INGX-201ENST00000359239 846 ntBASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 TMX3-202ENST00000443099 913 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC128688.1-201ENST00000487626 519 ntBASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC116562.4-202ENST00000641738 218 ntBASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3CPQ6ZMV5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC092338.2-201ENST00000568827 1415 ntBASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 RNF2P1-201ENST00000442955 1010 ntBASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 MTND1P1-201ENST00000445453 368 ntBASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 CCR12P-201ENST00000446203 998 ntBASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 FAM87A-204ENST00000613235 858 ntBASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 GAPDHP41-201ENST00000613707 975 ntBASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 AC004408.2-201ENST00000623613 2777 ntBASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.96■□□□□ 0.95
PPP4R3CPQ6ZMV5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PPP4R3CPQ6ZMV5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 AL356806.1-201ENST00000422524 916 ntBASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 EIF4A2P2-201ENST00000455776 1070 ntBASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 ECEL1P2-202ENST00000465689 757 ntBASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 AC010653.2-201ENST00000623505 997 ntBASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 DDX43P2-201ENST00000604753 1354 ntBASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP4R3CPQ6ZMV5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms