RNA–Protein interactions for RNA: ENST00000374594.1

CTNNAL1-203, Transcript of catenin alpha like 1, humanhuman

TSL 3 BASIC

Gene CTNNAL1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNAL1-203ENST00000374594 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
CTNNAL1-203ENST00000374594 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
CTNNAL1-203ENST00000374594 SENP3Q9H4L4 574 aaPredicted RBP26.47■■□□□ 1.83
CTNNAL1-203ENST00000374594 PHF23Q9BUL5 403 aaPredicted RBP26.15■■□□□ 1.78
CTNNAL1-203ENST00000374594 FOXD1Q16676 465 aa24.6■■□□□ 1.53
CTNNAL1-203ENST00000374594 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
CTNNAL1-203ENST00000374594 ADRA2BP18089 450 aa23.17■■□□□ 1.3
CTNNAL1-203ENST00000374594 PPP6R1Q9UPN7 881 aa23.16■■□□□ 1.3
CTNNAL1-203ENST00000374594 PIAS4Q8N2W9 510 aaPredicted RBP23.14■■□□□ 1.29
CTNNAL1-203ENST00000374594 MSH5O43196 834 aa22.98■■□□□ 1.27
CTNNAL1-203ENST00000374594 POTEDQ86YR6 584 aa22■■□□□ 1.11
CTNNAL1-203ENST00000374594 SCAF1Q9H7N4 1312 aaKnown RBP21.27■□□□□ 0.99
CTNNAL1-203ENST00000374594 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
CTNNAL1-203ENST00000374594 DMRT2Q9Y5R5 561 aa20.98■□□□□ 0.95
CTNNAL1-203ENST00000374594 PPP4R3CPQ6ZMV5 832 aa20.96■□□□□ 0.95
CTNNAL1-203ENST00000374594 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
CTNNAL1-203ENST00000374594 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
CTNNAL1-203ENST00000374594 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
CTNNAL1-203ENST00000374594 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.84
CTNNAL1-203ENST00000374594 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
CTNNAL1-203ENST00000374594 NPM3O75607 178 aaKnown RBP19.9■□□□□ 0.78
CTNNAL1-203ENST00000374594 KCNA4P22459 653 aa19.75■□□□□ 0.75
CTNNAL1-203ENST00000374594 CACNB1Q02641 598 aaPredicted RBP19.66■□□□□ 0.74
CTNNAL1-203ENST00000374594 RNF39Q9H2S5 420 aa19.57■□□□□ 0.72
CTNNAL1-203ENST00000374594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.71
CTNNAL1-203ENST00000374594 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
CTNNAL1-203ENST00000374594 C1QBPQ07021 282 aaKnown RBP19.34■□□□□ 0.69
CTNNAL1-203ENST00000374594 U3KPZ7 1027 aaPredicted RBP18.97■□□□□ 0.63
CTNNAL1-203ENST00000374594 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
CTNNAL1-203ENST00000374594 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
CTNNAL1-203ENST00000374594 CAPN15O75808 1086 aa18.73■□□□□ 0.59
CTNNAL1-203ENST00000374594 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
CTNNAL1-203ENST00000374594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
CTNNAL1-203ENST00000374594 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
CTNNAL1-203ENST00000374594 APLP2Q06481 763 aa18.6■□□□□ 0.57
CTNNAL1-203ENST00000374594 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
CTNNAL1-203ENST00000374594 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
CTNNAL1-203ENST00000374594 MYCNP04198 464 aaPredicted RBP18.44■□□□□ 0.54
CTNNAL1-203ENST00000374594 DSG3P32926 999 aa18.43■□□□□ 0.54
CTNNAL1-203ENST00000374594 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
CTNNAL1-203ENST00000374594 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
CTNNAL1-203ENST00000374594 ABCB7O75027 752 aa18.29■□□□□ 0.52
CTNNAL1-203ENST00000374594 ZBTB22O15209 634 aa18.09■□□□□ 0.49
CTNNAL1-203ENST00000374594 POLA2Q14181 598 aa17.99■□□□□ 0.47
CTNNAL1-203ENST00000374594 ATF5Q9Y2D1 282 aaPredicted RBP17.94■□□□□ 0.46
CTNNAL1-203ENST00000374594 ATXN8OSP0DMR3 200 aa17.74■□□□□ 0.43
CTNNAL1-203ENST00000374594 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
CTNNAL1-203ENST00000374594 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
CTNNAL1-203ENST00000374594 EHMT2Q96KQ7 1210 aa17.55■□□□□ 0.4
CTNNAL1-203ENST00000374594 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
CTNNAL1-203ENST00000374594 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
CTNNAL1-203ENST00000374594 FBLN2P98095 1184 aa17.36■□□□□ 0.37
CTNNAL1-203ENST00000374594 POTEHQ6S545 545 aa17.33■□□□□ 0.36
CTNNAL1-203ENST00000374594 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
CTNNAL1-203ENST00000374594 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
CTNNAL1-203ENST00000374594 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
CTNNAL1-203ENST00000374594 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
CTNNAL1-203ENST00000374594 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
CTNNAL1-203ENST00000374594 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
CTNNAL1-203ENST00000374594 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
CTNNAL1-203ENST00000374594 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
CTNNAL1-203ENST00000374594 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
CTNNAL1-203ENST00000374594 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
CTNNAL1-203ENST00000374594 SSUH2Q9Y2M2 353 aa16.81■□□□□ 0.28
CTNNAL1-203ENST00000374594 PIP4P2Q8N4L2 257 aa16.77■□□□□ 0.28
CTNNAL1-203ENST00000374594 SPDYE1Q8NFV5 336 aaPredicted RBP16.77■□□□□ 0.28
CTNNAL1-203ENST00000374594 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTNNAL1-203ENST00000374594 FXR2P51116 673 aaKnown RBP eCLIP16.66■□□□□ 0.26
CTNNAL1-203ENST00000374594 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
CTNNAL1-203ENST00000374594 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
CTNNAL1-203ENST00000374594 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
CTNNAL1-203ENST00000374594 HAX1O00165 279 aa16.51■□□□□ 0.23
CTNNAL1-203ENST00000374594 CHADLQ6NUI6 762 aa16.4■□□□□ 0.22
CTNNAL1-203ENST00000374594 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
CTNNAL1-203ENST00000374594 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
CTNNAL1-203ENST00000374594 EVX2Q03828 476 aa16.18■□□□□ 0.18
CTNNAL1-203ENST00000374594 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
CTNNAL1-203ENST00000374594 C19orf67A6NJJ6 358 aa16.13■□□□□ 0.17
CTNNAL1-203ENST00000374594 CREBZFQ9NS37 354 aa16.06■□□□□ 0.16
CTNNAL1-203ENST00000374594 CD44P16070 742 aaKnown RBP16.02■□□□□ 0.16
CTNNAL1-203ENST00000374594 PROM2Q8N271 834 aa15.99■□□□□ 0.15
CTNNAL1-203ENST00000374594 FKBP8Q14318 412 aa15.97■□□□□ 0.15
CTNNAL1-203ENST00000374594 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
CTNNAL1-203ENST00000374594 GABBR2O75899 941 aa15.88■□□□□ 0.13
CTNNAL1-203ENST00000374594 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
CTNNAL1-203ENST00000374594 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
CTNNAL1-203ENST00000374594 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
CTNNAL1-203ENST00000374594 MIER1Q8N108 512 aa15.81■□□□□ 0.12
CTNNAL1-203ENST00000374594 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
CTNNAL1-203ENST00000374594 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
CTNNAL1-203ENST00000374594 ZNF579Q8NAF0 562 aaKnown RBP15.71■□□□□ 0.11
CTNNAL1-203ENST00000374594 CLCN6P51797 869 aa15.7■□□□□ 0.1
CTNNAL1-203ENST00000374594 TSPYL2Q9H2G4 693 aaPredicted RBP15.63■□□□□ 0.09
CTNNAL1-203ENST00000374594 PHF12Q96QT6 1004 aa15.62■□□□□ 0.09
CTNNAL1-203ENST00000374594 DCBLD2Q96PD2 775 aa15.61■□□□□ 0.09
CTNNAL1-203ENST00000374594 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
CTNNAL1-203ENST00000374594 ZBTB47Q9UFB7 747 aaPredicted RBP15.56■□□□□ 0.08
CTNNAL1-203ENST00000374594 GALR2O43603 387 aaPredicted RBP15.53■□□□□ 0.08
CTNNAL1-203ENST00000374594 POTEIP0CG38 1075 aa15.47■□□□□ 0.07
CTNNAL1-203ENST00000374594 RASEFQ8IZ41 740 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms