Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 MIR3197-201ENST00000582241 73 ntBASIC22.64■■□□□ 1.21
RC3H1Q5TC82 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 AL353593.2-201ENST00000602529 1483 ntBASIC22.64■■□□□ 1.21
RC3H1Q5TC82 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
RC3H1Q5TC82 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 AC108073.2-201ENST00000464002 357 ntBASIC22.63■■□□□ 1.21
RC3H1Q5TC82 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RC3H1Q5TC82 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 HTR5BP-201ENST00000430851 1154 ntBASIC22.62■■□□□ 1.21
RC3H1Q5TC82 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 AC008667.4-201ENST00000607370 168 ntBASIC22.62■■□□□ 1.21
RC3H1Q5TC82 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RC3H1Q5TC82 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 CLDN5-201ENST00000403084 2357 ntBASIC22.61■■□□□ 1.21
RC3H1Q5TC82 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 AC005082.1-201ENST00000413042 2259 ntBASIC22.61■■□□□ 1.21
RC3H1Q5TC82 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RC3H1Q5TC82 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 AFG3L1P-217ENST00000557444 2447 ntBASIC22.6■■□□□ 1.21
RC3H1Q5TC82 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.6■■□□□ 1.21
RC3H1Q5TC82 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 AL049757.1-201ENST00000616842 1596 ntBASIC22.59■■□□□ 1.21
RC3H1Q5TC82 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 AL645939.2-201ENST00000427340 991 ntBASIC22.59■■□□□ 1.21
RC3H1Q5TC82 CNN2P11-201ENST00000429351 262 ntBASIC22.59■■□□□ 1.21
RC3H1Q5TC82 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 DUTP2-201ENST00000519164 463 ntBASIC22.59■■□□□ 1.21
RC3H1Q5TC82 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 AL513190.1-201ENST00000621254 727 ntBASIC22.59■■□□□ 1.21
RC3H1Q5TC82 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms