Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 AC120498.9-201ENST00000339021 3867 ntBASIC21.8■■□□□ 1.08
RFX7Q2KHR2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 REXO1L6P-202ENST00000619970 1078 ntBASIC21.79■■□□□ 1.08
RFX7Q2KHR2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 RNF165-205ENST00000588679 2904 ntBASIC21.79■■□□□ 1.08
RFX7Q2KHR2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX7Q2KHR2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 AC008764.6-201ENST00000595909 2069 ntBASIC21.78■■□□□ 1.08
RFX7Q2KHR2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX7Q2KHR2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 AC005336.2-201ENST00000593183 939 ntBASIC21.77■■□□□ 1.08
RFX7Q2KHR2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
RFX7Q2KHR2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.77■■□□□ 1.07
RFX7Q2KHR2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
RFX7Q2KHR2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RFX7Q2KHR2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RFX7Q2KHR2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 NUS1P2-201ENST00000417358 873 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms