Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 AC006116.8-202ENST00000587620 1550 ntBASIC17.43■□□□□ 0.38
HMGCS1Q01581 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 AC132938.6-201ENST00000623828 1655 ntBASIC17.42■□□□□ 0.38
HMGCS1Q01581 KRT18P55-202ENST00000578578 1546 ntBASIC17.42■□□□□ 0.38
HMGCS1Q01581 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 LINC01568-207ENST00000641790 1380 ntBASIC17.42■□□□□ 0.38
HMGCS1Q01581 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.42■□□□□ 0.38
HMGCS1Q01581 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCS1Q01581 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGCS1Q01581 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 AL512604.3-201ENST00000569583 964 ntBASIC17.41■□□□□ 0.38
HMGCS1Q01581 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGCS1Q01581 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCS1Q01581 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms